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You will need to follow exactly the following steps. You will see MATCH green sign under “New Transactions” section (blue navigation bar on the left > transactions > banking) of bank downloaded deposit (Received) column. In your case for $975.00!
Step#1 Invoice (create + > customers > invoice) for $1,000
Step#2 Receive Payment (create + > customers > receive payment) > select Deposit to: Undeposited Funds account from the drop-down > payment amount = $1,000
Step#3 Bank Deposit (create + > other > bank deposit) >
From the home page screen, click on the magnifying glass at the top middle of the page and choose “advanced search”
You can search/find the following transactions:
Billable Expense Charges
Credit Card Credits
Payments from Customers
Sales Tax Adjustments
Sales Tax Payments
However, you can not search Vendor Information or Customer Information or Products and Services Information at this time.
If you are looking to search for an invoice by number for example, you can click on the magnifying glass at the top middle of the page and choose “advanced search”. This will allow you to use a few different search options such as amount, amount (line or total) , date, last modified date, memo, name as well as by reference number.